MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-744

Family name MIR-744 (all species)
Seed GCGGGGC
Species Cow (Bos taurus)
MiRBase ID bta-mir-744
Paralogues
Orthologues Cfa-Mir-744  Cja-Mir-744  Cpo-Mir-744  Dno-Mir-744  Eca-Mir-744  Ete-Mir-744  Hsa-Mir-744  Laf-Mir-744  Mml-Mir-744  Mmr-Mir-744  Mmu-Mir-744  Ocu-Mir-744  Pab-Mir-744  Rno-Mir-744 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037346.1: 30697368-30697445 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGAGGAGGCUGCGCUCUGGGUUGGGCGGGGUGCGGGGCUAGGGCUAACAGCAGGCUCACUGACGGUUUCCCGGAAACCACGCACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUGCUCU
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Structure
        10          20        30        40         50        60         
CGAGGAGGCUGCGCUCU--| GU    CG    GC    C   -   U       GGCUCACUGACGGUUU 
                   GG  UGGG  GGGU  GGGG UAG GGC AACAGCA                \
                   CC  GCUC  UCCA  CUCC AUC CCG UUGUCGU                C
UCUCGUCGGCUCGGCCAGU^ UG    AU    A-    A   A   -       ACACGCACCAAAGGCC 
      130       120       110        100         90        80        70
Deep sequencing
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CommentAlthough the 3' uridine is templated the 3' DcRNA reads when present suggest that this is a Group 2 miRNA.
3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-744_5p

mirBase accessionMIMAT0009369
Sequence
0- UGCGGGGCUAGGGCUAACAGCA -22
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Proposed targets TargetScanVert: bta-miR-744
Star sequence

Bta-Mir-744_3p*

mirBase accessionNone
Sequence
57- CUGUUGCCACUAACCUCAACC -78
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