MirGeneDB 3.0

MirGeneDB ID

Rno-Mir-744

Family name MIR-744 (all species)
Seed GCGGGGC
Species Norway rat (Rattus norvegicus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-744  Cfa-Mir-744  Cja-Mir-744  Cpo-Mir-744  Dno-Mir-744  Eca-Mir-744  Ete-Mir-744  Hsa-Mir-744  Laf-Mir-744  Mml-Mir-744  Mmr-Mir-744  Mmu-Mir-744  Ocu-Mir-744  Pab-Mir-744 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(rn6)
chr10: 52244131-52244208 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGAAGAAGCAGCACUGGGCUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAGGGUCUCCUGGAGACCACACACAUGCUGUUACCACUAACCUCAACCUUACUCCGUCCUGACCGGCUCGGCUUCUCU
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Structure
        10          20        30        40         50        60         
GAGGAAGAAGCAGCACU--|   U   C     GC    C   -  C        GUCUUACUGAGGGUCU 
                   GGGC GGG AAGGU  GGGG UAG GG UAACAGCA                \
                   CCUG CUC UUCCA  CUCC AUC CC AUUGUCGU                C
UCUCUUCGGCUCGGCCAGU^   C   A     A-    A   A  -        ACACACACCAGAGGUC 
      130       120       110        100         90        80        70
Deep sequencing
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CommentAlthough the 3' uridine is templated the 3' DcRNA reads when present suggest that this is a Group 2 miRNA.
3' NTU Yes
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
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Mature sequence

Rno-Mir-744_5p

mirBase accessionNone
Sequence
0- UGCGGGGCUAGGGCUAACAGCA -22
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Star sequence

Rno-Mir-744_3p*

mirBase accessionNone
Sequence
57- CUGUUACCACUAACCUCAACC -78
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