| MirGeneDB ID | Rno-Mir-744 |
|---|
| Family name |
MIR-744 (all species) |
|---|
| Seed |
GCGGGGC |
|---|
| Species |
Norway rat (Rattus norvegicus) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cpo-Mir-744
Dno-Mir-744
Ete-Mir-744
Hsa-Mir-744
Mml-Mir-744
Mmu-Mir-744
Ocu-Mir-744
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(rn6) |
chr10: 52244131-52244208 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GAGGAAGAAGCAGCACUGGGCUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAGGGUCUCCUGGAGACCACACACAUGCUGUUACCACUAACCUCAACCUUACUCCGUCCUGACCGGCUCGGCUUCUCU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GAGGAAGAAGCAGCACU--| U C GC C - C GUCUUACUGAGGGUCU
GGGC GGG AAGGU GGGG UAG GG UAACAGCA \
CCUG CUC UUCCA CUCC AUC CC AUUGUCGU C
UCUCUUCGGCUCGGCCAGU^ C A A- A A - ACACACACCAGAGGUC
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Although the terminal U on the 3p arm is templated the structure and offset is consistent with this being a Group 2 miRNA. |
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
| Ad |
Ad |
Br |
Br |
Br |
Ce |
Ce |
Ce |
Ce |
Co |
Co |
Co |
Co |
Dr |
Dr |
Du |
Du |
Du |
Du |
He |
He |
Hi |
Hi |
Il |
Il |
Je |
Je |
Ki |
Ki |
Ki |
Ki |
Li |
Li |
Li |
Li |
Me |
Me |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Mu |
Ov |
Pa |
Pa |
St |
St |
St |
Te |
Ut |
Wh |
Br |
Fa |
He |
Ki |
La |
Li |
Li |
Lu |
Mu |
Pa |
Sk |
Sm |
Sp |
St |
Te |
Th |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Rno-Mir-744_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
|---|
| Star sequence |
Rno-Mir-744_3p* |
| mirBase accession | None |
|---|
| Sequence |
57- CUGUUACCACUAACCUCAACC -78
Get sequence
|
|---|
