MirGeneDB ID | Laf-Mir-744 |
Family name |
MIR-744 (all species) |
Seed |
GCGGGGC |
Species |
African bush elephant (Loxodonta africana) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cja-Mir-744
Cpo-Mir-744
Dno-Mir-744
Eca-Mir-744
Ete-Mir-744
Hsa-Mir-744
Mml-Mir-744
Mmr-Mir-744
Mmu-Mir-744
Ocu-Mir-744
Pab-Mir-744
Rno-Mir-744
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (GCA_000001905.1_Loxafr3.0) |
GL010074.1: 17065834-17065912 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGAAGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUCACUGAAGGUUUCCUGGAAACCACAUACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUUCUGUU
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGAAGAGGCAGCACACU---| GU C GC C - U GUCUCACUGAAGGUUU
GG UGGG AAGGU GGGG UAG GGC AACAGCA \
CC GCUC UUCCA CUCC AUC CCG UUGUCGU C
UUGUCUUCGGCUCGGCCAGU^ UG A A- A A - ACAUACACCAAAGGUC
130 120 110 100 90 80 70 |
Deep sequencing |
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|
3' NTU |
No
|
Motifs | UG at 5p(-14) |
Tissue expression
|
|
Mature sequence |
Laf-Mir-744_5p |
mirBase accession | None |
Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
Star sequence |
Laf-Mir-744_3p* |
mirBase accession | None |
Sequence |
57- CUGUUGCCACUAACCUCAACCU -79
Get sequence
|