MirGeneDB 3.0

MirGeneDB ID

Laf-Mir-744

Family name MIR-744 (all species)
Seed GCGGGGC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-744  Cfa-Mir-744  Cja-Mir-744  Cpo-Mir-744  Dno-Mir-744  Eca-Mir-744  Ete-Mir-744  Hsa-Mir-744  Mml-Mir-744  Mmr-Mir-744  Mmu-Mir-744  Ocu-Mir-744  Pab-Mir-744  Rno-Mir-744 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)
GL010074.1: 17065834-17065912 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGAAGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUCACUGAAGGUUUCCUGGAAACCACAUACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUUCUGUU
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Structure
        10           20        30        40         50        60         
AGAAGAGGCAGCACACU---| GU    C     GC    C   -   U       GUCUCACUGAAGGUUU 
                    GG  UGGG AAGGU  GGGG UAG GGC AACAGCA                \
                    CC  GCUC UUCCA  CUCC AUC CCG UUGUCGU                C
UUGUCUUCGGCUCGGCCAGU^ UG    A     A-    A   A   -       ACAUACACCAAAGGUC 
       130       120       110        100         90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Wh
Mature sequence

Laf-Mir-744_5p

mirBase accessionNone
Sequence
0- UGCGGGGCUAGGGCUAACAGCA -22
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Star sequence

Laf-Mir-744_3p*

mirBase accessionNone
Sequence
57- CUGUUGCCACUAACCUCAACCU -79
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