| MirGeneDB ID | Ocu-Mir-744 |
|---|
| Family name |
MIR-744 (all species) |
|---|
| Seed |
GCGGGGC |
|---|
| Species |
Rabbit (Oryctolagus cuniculus) |
|---|
| MiRBase ID |
ocu-mir-744
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Bta-Mir-744
Cfa-Mir-744
Cja-Mir-744
Cpo-Mir-744
Dno-Mir-744
Eca-Mir-744
Ete-Mir-744
Hsa-Mir-744
Laf-Mir-744
Mml-Mir-744
Mmr-Mir-744
Mmu-Mir-744
Pab-Mir-744
Rno-Mir-744
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
|---|
Genome context
(oryCun2_add) |
chr19: 7597902-7597979 [-]
UCSC
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGAAGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAAGGUUUCCUGGAAACCACACACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUUCUGU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
AGAAGAGGCAGCACACU--| GU C GC C - U GUCUUACUGAAGGUUU
GG UGGG AAGGU GGGG UAG GGC AACAGCA \
CC GCUC UUCCA CUCC AUC CCG UUGUCGU C
UGUCUUCGGCUCGGCCAGU^ UG A A- A A - ACACACACCAAAGGUC
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| Comment | Although the 3' uridine is templated the 3' DcRNA reads when present suggest that this is a Group 2 miRNA. |
|---|
| 3' NTU |
Yes
|
|---|
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Mature sequence |
Ocu-Mir-744_5p |
| mirBase accession | MIMAT0048563 |
|---|
| Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
|---|
| Star sequence |
Ocu-Mir-744_3p* |
| mirBase accession | MIMAT0048564 |
|---|
| Sequence |
57- CUGUUGCCACUAACCUCAACC -78
Get sequence
|
|---|
