| MirGeneDB ID | Cja-Mir-744 |
|---|---|
| Family name | MIR-744 (all species) |
| Seed | GCGGGGC |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-744 Cfa-Mir-744 Cpo-Mir-744 Dno-Mir-744 Eca-Mir-744 Ete-Mir-744 Hsa-Mir-744 Laf-Mir-744 Mml-Mir-744 Mmr-Mir-744 Mmu-Mir-744 Ocu-Mir-744 Pab-Mir-744 Rno-Mir-744 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021919.1: 74747658-74747735 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | AGAAGAGGCAGCACACUGGGUUGGGCAAGGUGCGGGGCUAGGGCUAACAGCAGUCUUACUGAAGGUUUCCUGGAAACCAUGCACAUGCUGUUGCCACUAACCUCAACCUUACUCGGUCCUGACCGGCUCGGCUUCUGUGet precursor sequence |
| Structure | 10 20 30 40 50 60 AGAAGAGGCAGCACACU--| GU C GC C - U GUCUUACUGAAGGUUU GG UGGG AAGGU GGGG UAG GGC AACAGCA \ CC GCUC UUCCA CUCC AUC CCG UUGUCGU C UGUCUUCGGCUCGGCCAGU^ UG A A- A A - ACACGUACCAAAGGUC 130 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-744_5p |
| mirBase accession | None |
| Sequence |
0- UGCGGGGCUAGGGCUAACAGCA -22
Get sequence
|
| Star sequence | Cja-Mir-744_3p* (predicted) |
| mirBase accession | None |
| Sequence |
57- CUGUUGCCACUAACCUCAACC -78
Get sequence
|
