MirGeneDB 3.0
MirGeneDB ID

Cel-Let-7-P9

Family name LET-7 (all species)
Seed GAGGUAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-795
Paralogues Cel-Let-7-P5  Cel-Let-7-P6  Cel-Let-7-P7  Cel-Let-7-P8 
Orthologues Aae-Let-7  Aga-Let-7  Agr-Let-7  Bge-Let-7  Bko-Let-7  Bpl-Let-7  Cte-Let-7  Dan-Let-7  Dlo-Let-7  Dma-Let-7  Dme-Let-7  Dmo-Let-7  Dpu-Let-7  Dsi-Let-7  Dya-Let-7  Eba-Let-7  Egr-Let-7  Esc-Let-7  Gpa-Let-7  Gsa-Let-7  Gsp-Let-7  Hme-Let-7  Hmi-Let-7  Hru-Let-7  Isc-Let-7  Lan-Let-7  Lgi-Let-7  Lhy-Let-7  Llo-Let-7  Mgi-Let-7  Mom-Let-7  Npo-Let-7  Obi-Let-7  Ofu-Let-7  Ovu-Let-7  Pau-Let-7  Pca-Let-7  Pcr-Let-7  Pdu-Let-7  Pfl-Let-7  Ple-Let-7  Pmi-Let-7  Pve-Let-7  Rph-Let-7  Sko-Let-7  Sma-Let-7  Sne-Let-7  Snu-Let-7  Spu-Let-7  Sro-Let-7  Tca-Let-7  Tur-Let-7  War-Let-7  Xbo-Let-7 
Node of Origin (locus) C. elegans
Node of Origin (family) Bilateria
Genome context
(ce11)		 chrI: 12594583-12594643 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Let-7-P9)		 Let-7-P9 chrI: 12594583-12594643 [+] UCSC Ensembl
Mir-794 chrI: 12595704-12595762 [+] UCSC Ensembl
Mir-1823-v1 chrI: 12608635-12608692 [+] UCSC Ensembl
Mir-1823-v2 chrI: 12608635-12608692 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCUAUACAUAUUCCGAGAAACGUUACCUGCUGAGGUAGAUUGAUCAGCGAGCUUGAUACCCCGUUCAAAAUCGUGAUCAGUAUACUUCGUCAGGCAGCUUGUUUUCUUUUUGUGUUCGGAA
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Structure
        10        20          30        40        50        60
GCUAUACAUAUUCCGAGAAAC--|  A    C       G        G   GC  GAUAC 
                       GUU CCUG UGAGGUA AUUGAUCA CGA  UU     C
                       CGA GGAC GCUUCAU UGACUAGU GCU  AA     C
AAGGCUUGUGUUUUUCUUUUGUU^  C    U       A        -   AA  CUUGC 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Mature sequence

Cel-Let-7-P9_5p
mirBase accessionMIMAT0004230
Sequence 
0- UGAGGUAGAUUGAUCAGCGAGCUU -24
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Proposed targets microrna.org: MIMAT0004230
TargetScanWorm: cel-miR-795
Star sequence

Cel-Let-7-P9_3p*
mirBase accessionMIMAT0020353
Sequence 
38- AAUCGUGAUCAGUAUACUUCGUC -61
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