MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-186

Family name MIR-186 (all species)
Seed AAAGAAU
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-186  Cfa-Mir-186  Cpo-Mir-186  Dno-Mir-186  Eca-Mir-186  Ete-Mir-186  Hsa-Mir-186  Laf-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmr-Mir-186  Mmu-Mir-186  Neu-Mir-186  Oan-Mir-186  Ocu-Mir-186  Pab-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021921.1: 105435886-105435946 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CCAAACAUUUUUUCAUUGCUUGUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGGUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUCCUUCAACCAAAAU
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Structure
        10           20        30        40        50        60
CCAAACAUUUUUUCAUU---|    U                 U     U     UUCUGGU 
                    GCUUG AACUUUCCAAAGAAUUC CCUUU GGGCU       U
                    CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGA       U
UAAAACCAACUUCCUUAAAU^    -                 U     -     AUUUUAU 
 .       110       100         90        80         70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-186_5p
mirBase accessionNone
Sequence 
0- CAAAGAAUUCUCCUUUUGGGCU -22
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Star sequence

Cja-Mir-186_3p*
mirBase accessionNone
Sequence 
40- CCCAAAGGUGAAUUUUUUGGG -61
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