| MirGeneDB ID | Cja-Mir-186 |
|---|---|
| Family name | MIR-186 (all species) |
| Seed | AAAGAAU |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-186 Cfa-Mir-186 Cpo-Mir-186 Dno-Mir-186 Eca-Mir-186 Ete-Mir-186 Hsa-Mir-186 Laf-Mir-186 Mdo-Mir-186 Mml-Mir-186 Mmr-Mir-186 Mmu-Mir-186 Neu-Mir-186 Oan-Mir-186 Ocu-Mir-186 Pab-Mir-186 Rno-Mir-186 Sha-Mir-186 |
| Node of Origin (locus) | Mammalia |
| Node of Origin (family) | Mammalia |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021921.1: 105435886-105435946 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAAACAUUUUUUCAUUGCUUGUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGGUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUCCUUCAACCAAAAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCAAACAUUUUUUCAUU---| U U U UUCUGGU GCUUG AACUUUCCAAAGAAUUC CCUUU GGGCU U CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGA U UAAAACCAACUUCCUUAAAU^ - U - AUUUUAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-186_5p |
| mirBase accession | None |
| Sequence |
0- CAAAGAAUUCUCCUUUUGGGCU -22
Get sequence
|
| Star sequence | Cja-Mir-186_3p* |
| mirBase accession | None |
| Sequence |
40- CCCAAAGGUGAAUUUUUUGGG -61
Get sequence
|
