MirGeneDB 3.0

MirGeneDB ID

Ete-Mir-186

Family name MIR-186 (all species)
Seed AAAGAAU
Species Lesser hedgehog tenrec (Echinops telfairi)
MiRBase ID
Paralogues
Orthologues Bta-Mir-186  Cfa-Mir-186  Cja-Mir-186  Cpo-Mir-186  Dno-Mir-186  Eca-Mir-186  Hsa-Mir-186  Laf-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmr-Mir-186  Mmu-Mir-186  Neu-Mir-186  Oan-Mir-186  Ocu-Mir-186  Pab-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(echTel2)
JH980298: 53142021-53142081 [+] UCSC
Precursor
(pre-Mir +30nt flank)
CCAAACAUUUUUUCAUUGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUGUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAAUCCUUCAACCAAAUA
Get precursor sequence
Structure
        10           20        30        40        50        60
CCAAACAUUUUUUCAUU---|    U                 U     U      UCUGAU 
                    GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU      G
                    CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA      U
AUAAACCAACUUCCUAAAAU^    -                 U     -      UUUUAU 
 .       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Ete-Mir-186_5p

mirBase accessionNone
Sequence
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
Star sequence

Ete-Mir-186_3p*

mirBase accessionNone
Sequence
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence