| MirGeneDB ID | Eca-Mir-186 |
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| Family name |
MIR-186 (all species) |
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| Seed |
AAAGAAU |
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| Species |
Horse (Equus caballus) |
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| MiRBase ID |
eca-mir-186
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| Paralogues |
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| Orthologues |
Bta-Mir-186
Cfa-Mir-186
Cja-Mir-186
Cpo-Mir-186
Dno-Mir-186
Ete-Mir-186
Hsa-Mir-186
Laf-Mir-186
Mdo-Mir-186
Mml-Mir-186
Mmr-Mir-186
Mmu-Mir-186
Neu-Mir-186
Oan-Mir-186
Ocu-Mir-186
Pab-Mir-186
Rno-Mir-186
Sha-Mir-186
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| Node of Origin (locus) |
Mammalia
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| Node of Origin (family) |
Mammalia
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Genome context
(GCA_002863925.1_EquCab3.0) |
CM009152.1: 87758218-87758278 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCAAACCUUUUUUCAUUGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUACUUCAACUAAAAU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UCAAACCUUUUUUCAUU---| U U U UCUGAU
GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU U
CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA U
UAAAAUCAACUUCAUUAAAU^ - U - UUUUAU
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
Unknown
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| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
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Tissue expression
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| Ps |
Bo |
Ca |
Em |
En |
En |
En |
En |
En |
En |
En |
Gl |
He |
He |
Ho |
Im |
Ki |
Li |
Lo |
Lu |
Ma |
Ma |
Mi |
Pl |
Sp |
Te |
Tr |
Ut |
Ut |
Yo |
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| Mature sequence |
Eca-Mir-186_5p |
| mirBase accession | MIMAT0012956 |
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| Sequence |
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
|
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| Star sequence |
Eca-Mir-186_3p* (predicted) |
| mirBase accession | None |
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| Sequence |
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence
|
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