MirGeneDB 3.0

MirGeneDB ID

Eca-Mir-186

Family name MIR-186 (all species)
Seed AAAGAAU
Species Horse (Equus caballus)
MiRBase ID eca-mir-186
Paralogues
Orthologues Bta-Mir-186  Cfa-Mir-186  Cja-Mir-186  Cpo-Mir-186  Dno-Mir-186  Ete-Mir-186  Hsa-Mir-186  Laf-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmr-Mir-186  Mmu-Mir-186  Neu-Mir-186  Oan-Mir-186  Ocu-Mir-186  Pab-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(GCA_002863925.1_EquCab3.0)
CM009152.1: 87758218-87758278 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAAACCUUUUUUCAUUGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAAUUACUUCAACUAAAAU
Get precursor sequence
Structure
        10           20        30        40        50        60
UCAAACCUUUUUUCAUU---|    U                 U     U      UCUGAU 
                    GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU      U
                    CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA      U
UAAAAUCAACUUCAUUAAAU^    -                 U     -      UUUUAU 
 .       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-186_5p

mirBase accessionMIMAT0012956
Sequence
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
Star sequence

Eca-Mir-186_3p* (predicted)

mirBase accessionNone
Sequence
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence