| MirGeneDB ID | Laf-Mir-186 |
|---|---|
| Family name | MIR-186 (all species) |
| Seed | AAAGAAU |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-186 Cfa-Mir-186 Cja-Mir-186 Cpo-Mir-186 Dno-Mir-186 Eca-Mir-186 Ete-Mir-186 Hsa-Mir-186 Mdo-Mir-186 Mml-Mir-186 Mmr-Mir-186 Mmu-Mir-186 Neu-Mir-186 Oan-Mir-186 Ocu-Mir-186 Pab-Mir-186 Rno-Mir-186 Sha-Mir-186 |
| Node of Origin (locus) | Mammalia |
| Node of Origin (family) | Mammalia |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010044.1: 22361485-22361545 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CCAAACAUUUUUUCAUCGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUCUGAUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGAGCUAAACUCCGUCAAACAAAAUGet precursor sequence |
| Structure | 10 20 30 40 50 60 CCAAACAUUUUUUCAUC---| U U U UCUGAU GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU U CGAGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA U UAAAACAAACUGCCUCAAAU^ - U - UUUUAU . 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17) |
| Mature sequence | Laf-Mir-186_5p |
| mirBase accession | None |
| Sequence |
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
|
| Star sequence | Laf-Mir-186_3p* |
| mirBase accession | None |
| Sequence |
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence
|
