MirGeneDB 2.1

MirGeneDB ID

Ocu-Mir-186

Family name MIR-186 (all species)
Seed AAAGAAU
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-186
Paralogues
Orthologues Bta-Mir-186  Cfa-Mir-186  Cpo-Mir-186  Dno-Mir-186  Ete-Mir-186  Hsa-Mir-186  Mdo-Mir-186  Mml-Mir-186  Mmu-Mir-186  Oan-Mir-186  Rno-Mir-186  Sha-Mir-186 
Node of Origin (locus) Mammalia
Node of Origin (family) Mammalia
Genome context
(oryCun2_add)
chr13: 94980787-94980847 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCUUCCCAAUUUUUAUUGCUUAUAACUUUCCAAAGAAUUCUCCUUUUGGGCUUGCUGGUUUUAUUUUAAGCCCAAAGGUGAAUUUUUUGGGAAGUUUGGGCUAAAUUCCUUCAACCAAAAU
Get precursor sequence
Structure
        10           20        30        40        50        60
UCUUCCCAAUUUUUAUU---|    U                 U     U      GCUGGU 
                    GCUUA AACUUUCCAAAGAAUUC CCUUU GGGCUU      U
                    CGGGU UUGAAGGGUUUUUUAAG GGAAA CCCGAA      U
UAAAACCAACUUCCUUAAAU^    -                 U     -      UUUUAU 
 .       110       100         90        80         70
Deep sequencing
Go to detailed chart
3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
He Ki Te To Wh
Mature sequence

Ocu-Mir-186_5p

mirBase accessionMIMAT0048293
Sequence
0- CAAAGAAUUCUCCUUUUGGGCUU -23
Get sequence
Star sequence

Ocu-Mir-186_3p*

mirBase accessionMIMAT0048294
Sequence
39- GCCCAAAGGUGAAUUUUUUGGG -61
Get sequence