MirGeneDB ID | Neu-Mir-186 |
---|---|
Family name | MIR-186 (all species) |
Seed | AAAGAAU |
Species | Tammar Wallaby (Notamacropus eugenii) |
MiRBase ID | |
Paralogues | |
Orthologues | Bta-Mir-186 Cfa-Mir-186 Cja-Mir-186 Cpo-Mir-186 Dno-Mir-186 Eca-Mir-186 Ete-Mir-186 Hsa-Mir-186 Laf-Mir-186 Mdo-Mir-186 Mml-Mir-186 Mmr-Mir-186 Mmu-Mir-186 Oan-Mir-186 Ocu-Mir-186 Pab-Mir-186 Rno-Mir-186 Sha-Mir-186 |
Node of Origin (locus) | Mammalia |
Node of Origin (family) | Mammalia |
Genome context (GCA_028372415.1_mMacEug1.pri) |
CM051814.1: 531672130-531672190 [-] UCSC Ensembl |
Precursor (pre-Mir +30nt flank) | CCCUCACAUUUUUGCUUGCUCACAACUUUCCAAAGAAUUCUCCUUUUGGGCUUUUUAUUCUUAAUCUCAGCCCAAAGGUGAAUUUUUUGGGAUGUUUGAGCUAAAUGCUUCAGCCAUAAUUGet precursor sequence |
Structure | 10 20 30 40 50 60 CCCUCACAUUUUUGCUU---| C U U U UUUUAUU GCUCA AAC UUCCAAAGAAUUC CCUUU GGGCU C CGAGU UUG AGGGUUUUUUAAG GGAAA CCCGA U UUAAUACCGACUUCGUAAAU^ - U U - CUCUAAU . 110 100 90 80 70 |
Deep sequencing | |
3' NTU | Unknown |
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Mature sequence | Neu-Mir-186_5p |
mirBase accession | None |
Sequence |
0- CAAAGAAUUCUCCUUUUGGGCU -22
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|
Star sequence | Neu-Mir-186_3p* |
mirBase accession | None |
Sequence |
40- CCCAAAGGUGAAUUUUUUGGG -61
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|