| MirGeneDB ID | Cja-Mir-383-v2 |
|---|---|
| Family name | MIR-383 (all species) |
| Seed | AGAUCAG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | Cja-Mir-383-v1 |
| Orthologues | Aca-Mir-383-v2 Ami-Mir-383-v2 Bta-Mir-383-v2 Cfa-Mir-383-v2 Cli-Mir-383-v2 Cpi-Mir-383-v2 Cpo-Mir-383-v2 Dno-Mir-383-v2 Eca-Mir-383-v2 Ete-Mir-383-v2 Gga-Mir-383-v2 Gja-Mir-383-v2 Hsa-Mir-383-v2 Laf-Mir-383-v2 Mdo-Mir-383-v2 Mml-Mir-383-v2 Mmr-Mir-383-v2 Mmu-Mir-383-v2 Mun-Mir-383 Oan-Mir-383-v2 Ocu-Mir-383-v2 Pab-Mir-383-v2 Pbv-Mir-383-v2 Rno-Mir-383-v2 Sha-Mir-383-v2 Spt-Mir-383 Tgu-Mir-383-v2 Xtr-Mir-383-v2 |
| Node of Origin (locus) | Tetrapoda |
| Node of Origin (family) | Tetrapoda |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021927.1: 23672868-23672931 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GACUUCAGAAUCUCCACGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUGGAUAUUAAUCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUUUACCUCAUGGet precursor sequence |
| Structure | 10 20 30 40 50 60 GACUUCAGAAUCUCCACGU- C C-| A AA A UUGGGUGG CAC UGCUC UC GAUCAG GGUG UUGUGGCU \ GUG ACGAG AG CUGGUC UCAC GACACCGA A GUACUCCAUUUUCCGAUCCU A AA^ A CG - CUAAUUAU 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | No |
| Mature sequence | Cja-Mir-383-v2_5p (predicted) |
| mirBase accession | None |
| Sequence |
0- CAGAUCAGAAGGUGAUUGUGGCU -23
Get sequence
|
| Star sequence | Cja-Mir-383-v2_3p* (predicted) |
| mirBase accession | None |
| Sequence |
42- CCACAGCACUGCCUGGUCAGAA -64
Get sequence
|
