MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-383
Paralogues Ami-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Bta-Mir-383-v2  Cfa-Mir-383-v2  Cja-Mir-383-v2  Cli-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Eca-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Laf-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmr-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pab-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Sha-Mir-383-v2  Spt-Mir-383  Tgu-Mir-383-v2  Xtr-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017707947.1: 47528512-47528574 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-383-v2)		 Mir-383-v1 NW_017707947.1: 47528512-47528573 [-] UCSC
Mir-383-v2 NW_017707947.1: 47528512-47528574 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GCUGAAAGAAUCGCCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAGAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACCUCCA
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Structure
        10        20         30        40        50        60  
GCUGAAAGAAUCGCCAAGU   C     C-| A      AA    A        UUGAGUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
ACCUCCAUUUUCCGAUCAU   A     AA^ A      CG    -        CGAAUUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ami-Mir-383-v2_5p
mirBase accessionMIMAT0038276
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Star sequence

Ami-Mir-383-v2_3p* (predicted)
mirBase accessionNone
Sequence 
42- CCACAGCACUGCCUGGUCAGA -63
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