MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-383
Paralogues Ami-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017707947.1: 47528512-47528573 [-] UCSC
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v1 NW_017707947.1: 47528512-47528573 [-] UCSC
Mir-383-v2 NW_017707947.1: 47528512-47528574 [-] UCSC
Precursor
(pre-Mir +30nt flank)
CUGAAAGAAUCGCCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAGUAGAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACCUCCA
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Structure
        10         20         30        40        50        60 
CUGAAAGAAUCGCCAAGU-   C     C-| A      AA    A        UUGAGUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
ACCUCCAUUUUCCGAUCAU   A     AA^ A      CG    -        CGAAUUAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
To
Mature sequence

Ami-Mir-383-v1_5p
mirBase accessionMIMAT0038276
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Ami-Mir-383-v1_3p* (predicted)
mirBase accessionNone
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
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