Mir-383-v1

MirGeneDB ID

Oan-Mir-383-v1

Family name

MIR-383 (all species)

Seed

GAUCAGA

Species

Platypus (Ornithorhynchus anatinus)

MiRBase ID

oan-mir-383

Paralogues

Oan-Mir-383-v2

Orthologues

Aca-Mir-383-v1 Ami-Mir-383-v1 Bta-Mir-383-v1 Cfa-Mir-383-v1 Cja-Mir-383-v1 Cli-Mir-383-v1 Cpi-Mir-383-v1 Cpo-Mir-383-v1 Dno-Mir-383-v1 Eca-Mir-383-v1 Ete-Mir-383-v1 Gga-Mir-383-v1 Gja-Mir-383-v1 Hsa-Mir-383-v1 Laf-Mir-383-v1 Mdo-Mir-383-v1 Mml-Mir-383-v1 Mmr-Mir-383-v1 Mmu-Mir-383-v1 Mun-Mir-383 Ocu-Mir-383-v1 Pab-Mir-383-v1 Pbv-Mir-383-v1 Rno-Mir-383-v1 Sha-Mir-383-v1 Spt-Mir-383 Tgu-Mir-383-v1 Xtr-Mir-383-v1

Node of Origin (locus)

Tetrapoda

Node of Origin (family)

Tetrapoda

Genome context
(mOrnAna1.p.v1_plustraces)

NC_041739.1: 57271955-57272016 [+]

Clustered miRNAs
(< 50kb from Mir-383-v1)

Mir-383-v2 NC_041739.1: 57271954-57272016 [+]
Mir-383-v1 NC_041739.1: 57271955-57272016 [+]

Precursor
(pre-Mir +30nt flank)

GCAAGAGAAUCUCGGAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGUAGCUACUAAGCAGCCACAACACUGCCUGGUCAGAAAGAGCAAGUGGACAAGCCUUUUGUGACUC

Get precursor sequence

Structure

        10         20         30        40        50        60 
GCAAGAGAAUCUCGGAG-    C     C-| A      AA    A        UUGGGUAG 
                  UCAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                  GGUG ACGAG  AG CUGGUC  UCAC AACACCGA        C
CUCAGUGUUUUCCGAACA    A     AA^ A      CG    -        CGAAUCAU 
120       110       100        90        80         70