MirGeneDB 3.0
MirGeneDB ID

Gja-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Schlegels Japanese gecko (Gekko japonicus)
MiRBase ID
Paralogues Gja-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(GCF_001447785.1_Gekko_japonicus)		 NW_015173864.1: 7401-7462 [-]
Precursor
(pre-Mir +30nt flank)
CUGGGAGAGCCCUCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUGGGUUCGAUAUUAAACAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUCGCCUUUUGCCACAU
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Structure
        10         20         30        40        50        60 
CUGGGAGAGCCCUCAAGU-   C     C-| A      AA    A        UGGGUUCG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
UACACCGUUUUCCGCUCAU   A     AA^ A      CG    -        CAAAUUAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Gja-Mir-383-v1_5p
mirBase accessionNone
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Gja-Mir-383-v1_3p* (predicted)
mirBase accessionNone
Sequence 
41- CCACAGCACUGCCUGGUCAGA -62
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