MirGeneDB 3.0
MirGeneDB ID

Sha-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID sha-mir-383
Paralogues Sha-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cli-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(DEVIL_add)		 GL864737.1: 2362167-2362228 [+] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 GL864737.1: 2362166-2362228 [+] UCSC Ensembl
Mir-383-v1 GL864737.1: 2362167-2362228 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCAGAAGCUCCAAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGGGCAGACAUGGAACAGCCACAUCACUGGCUGGUCAGAAAGAGCAAGUGUCCUAGCCUUGGGCCUCAC
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Structure
        10         20         30        40        50        60 
CAGCAGAAGCUCCAAAGU-   C     C-| A      AA      U      UUGGGCAG 
                   CAC UGCUC  UC GAUCAG  GGUGAU GUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCACUA CACCGA        A
CACUCCGGGUUCCGAUCCU   A     AA^ A      GG      -      CAAGGUAC 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Bo Br He Ki Li Ly Pa Sk Sp Te
Mature sequence

Sha-Mir-383-v1_5p
mirBase accessionMIMAT0022829
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
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Star sequence

Sha-Mir-383-v1_3p*
mirBase accessionNone
Sequence 
41- CCACAUCACUGGCUGGUCAGA -62
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