MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-383-v1

Family name MIR-383 (all species)
Seed GAUCAGA
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-383
Paralogues Cli-Mir-383-v2 
Orthologues Aca-Mir-383-v1  Ami-Mir-383-v1  Bta-Mir-383-v1  Cfa-Mir-383-v1  Cja-Mir-383-v1  Cpi-Mir-383-v1  Cpo-Mir-383-v1  Dno-Mir-383-v1  Eca-Mir-383-v1  Ete-Mir-383-v1  Gga-Mir-383-v1  Gja-Mir-383-v1  Hsa-Mir-383-v1  Laf-Mir-383-v1  Mdo-Mir-383-v1  Mml-Mir-383-v1  Mmr-Mir-383-v1  Mmu-Mir-383-v1  Mun-Mir-383  Oan-Mir-383-v1  Ocu-Mir-383-v1  Pab-Mir-383-v1  Pbv-Mir-383-v1  Rno-Mir-383-v1  Sha-Mir-383-v1  Spt-Mir-383  Tgu-Mir-383-v1  Xtr-Mir-383-v1 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(colLiv2)		 scaffold38: 1608644-1608705 [+]
Clustered miRNAs
(< 50kb from Mir-383-v1)		 Mir-383-v2 scaffold38: 1608643-1608705 [+]
Mir-383-v1 scaffold38: 1608644-1608705 [+]
Precursor
(pre-Mir +30nt flank)
GGAAGAGAAUCACCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAAUAGCUAUUAAGCAGCCACAGCACUACCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACUUCUU
Get precursor sequence
Structure
        10         20         30        40        50        60 
GGAAGAGAAUCACCAAGU-   C     C-| A      AA    A        UUGAAUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        C
UUCUUCAUUUUCCGAUCAU   A     AA^ A      CA    -        CGAAUUAU 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-383-v1_5p
mirBase accessionMIMAT0038630
Sequence 
0- AGAUCAGAAGGUGAUUGUGGCU -22
Get sequence
Star sequence

Cli-Mir-383-v1_3p*
mirBase accessionMIMAT0038631
Sequence 
41- CCACAGCACUACCUGGUCAGA -62
Get sequence