MirGeneDB 3.0
MirGeneDB ID

Cli-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species Rock pigeon (Columba livia)
MiRBase ID cli-mir-383
Paralogues Cli-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Ami-Mir-383-v2  Bta-Mir-383-v2  Cfa-Mir-383-v2  Cja-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Eca-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Laf-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmr-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pab-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Sha-Mir-383-v2  Spt-Mir-383  Tgu-Mir-383-v2  Xtr-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(colLiv2)		 scaffold38: 1608643-1608705 [+]
Clustered miRNAs
(< 50kb from Mir-383-v2)		 Mir-383-v2 scaffold38: 1608643-1608705 [+]
Mir-383-v1 scaffold38: 1608644-1608705 [+]
Precursor
(pre-Mir +30nt flank)
UGGAAGAGAAUCACCAAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUGAAUAGCUAUUAAGCAGCCACAGCACUACCUGGUCAGAAAGAGCAAGUGUACUAGCCUUUUACUUCUU
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Structure
        10        20         30        40        50        60  
UGGAAGAGAAUCACCAAGU   C     C-| A      AA    A        UUGAAUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        C
UUCUUCAUUUUCCGAUCAU   A     AA^ A      CA    -        CGAAUUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Li Mi Ov Pe Te To
Mature sequence

Cli-Mir-383-v2_5p
mirBase accessionMIMAT0038630
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Star sequence

Cli-Mir-383-v2_3p*
mirBase accessionMIMAT0038631
Sequence 
42- CCACAGCACUACCUGGUCAGA -63
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