MirGeneDB 3.0
MirGeneDB ID

Xtr-Mir-383-v2

Family name MIR-383 (all species)
Seed AGAUCAG
Species Tropical clawed frog (Xenopus tropicalis)
MiRBase ID xtr-mir-383
Paralogues Xtr-Mir-383-v1 
Orthologues Aca-Mir-383-v2  Ami-Mir-383-v2  Bta-Mir-383-v2  Cfa-Mir-383-v2  Cja-Mir-383-v2  Cli-Mir-383-v2  Cpi-Mir-383-v2  Cpo-Mir-383-v2  Dno-Mir-383-v2  Eca-Mir-383-v2  Ete-Mir-383-v2  Gga-Mir-383-v2  Gja-Mir-383-v2  Hsa-Mir-383-v2  Laf-Mir-383-v2  Mdo-Mir-383-v2  Mml-Mir-383-v2  Mmr-Mir-383-v2  Mmu-Mir-383-v2  Mun-Mir-383  Oan-Mir-383-v2  Ocu-Mir-383-v2  Pab-Mir-383-v2  Pbv-Mir-383-v2  Rno-Mir-383-v2  Sha-Mir-383-v2  Spt-Mir-383  Tgu-Mir-383-v2 
Node of Origin (locus) Tetrapoda
Node of Origin (family) Tetrapoda
Genome context
(xenTro9_add)		 chr1: 32341380-32341442 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-383-v2)		 Mir-383-v1 chr1: 32341380-32341441 [-] UCSC Ensembl
Mir-383-v2 chr1: 32341380-32341442 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUACGGGAUACCUCAGUCACCUGCUCCUCAGAUCAGAAGGUGAUUGUGGCUUUUAGUAGAUAUUAAGCAGCCACAGCACUGCCUGGUCAGAAAGAGCAAGUGUACUUGCCUUUUGCUCCGA
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Structure
        10        20         30        40        50        60  
UCAUACGGGAUACCUCAGU   C     C-| A      AA    A        UUUAGUAG 
                   CAC UGCUC  UC GAUCAG  GGUG UUGUGGCU        \
                   GUG ACGAG  AG CUGGUC  UCAC GACACCGA        A
AGCCUCGUUUUCCGUUCAU   A     AA^ A      CG    -        CGAAUUAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
An Br Em Em He Ve
Mature sequence

Xtr-Mir-383-v2_5p
mirBase accessionMIMAT0003639
Sequence 
0- CAGAUCAGAAGGUGAUUGUGGCU -23
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Proposed targets TargetScanVert: xtr-miR-383
Star sequence

Xtr-Mir-383-v2_3p*
mirBase accessionNone
Sequence 
42- CCACAGCACUGCCUGGUCAGA -63
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