| MirGeneDB ID | Cja-Mir-483 |
|---|---|
| Family name | MIR-483 (all species) |
| Seed | AGACGGG |
| Species | White-tufted-ear marmoset (Callithrix jacchus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-483-v1 Bta-Mir-483-v2 Cfa-Mir-483 Cpo-Mir-483 Dno-Mir-483 Eca-Mir-483-v1 Eca-Mir-483-v2 Ete-Mir-483 Hsa-Mir-483 Mml-Mir-483 Mmr-Mir-483 Mmu-Mir-483 Neu-Mir-483 Ocu-Mir-483 Pab-Mir-483 Rno-Mir-483 Sha-Mir-483 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_011100555.2_mCalJa1.2.pat.X_genomic) |
CM021925.1: 126483162-126483224 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | UAGCUGAGCCUUGCUGUGGGGGAGAGGGGGAAGACGGGAGGAAAGAAGGGAGUGGUUCCAUCGCGCCUCCUCACUCCUCUCCUCCCGUCUUCUUCUCUCCUGCCCUGUCUCCCUGUCUCAGCAGet precursor sequence |
| Structure | 10 20 30 40 50 60 UAGCUGAGCCUUGCUGU- --| G A A G UGGUUCCA GGG GGAGAGGGG AAGACGGGAGGA AG AG GAG \ CCC CCUCUCUUC UUCUGCCCUCCU UC UC CUC U ACGACUCUGUCCCUCUGU GU^ - C C A CUCCGCGC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Cja-Mir-483_5p |
| mirBase accession | None |
| Sequence |
0- AAGACGGGAGGAAAGAAGGGAG -22
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|
| Co-mature sequence | Cja-Mir-483_3p |
| mirBase accession | None |
| Sequence |
41- CACUCCUCUCCUCCCGUCUUCU -63
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|
