MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-483

Family name MIR-483 (all species)
Seed AGGCGGG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-483-v1  Bta-Mir-483-v2  Cfa-Mir-483  Cja-Mir-483  Cpo-Mir-483  Dno-Mir-483  Eca-Mir-483-v1  Eca-Mir-483-v2  Ete-Mir-483  Hsa-Mir-483  Mml-Mir-483  Mmu-Mir-483  Neu-Mir-483  Ocu-Mir-483  Pab-Mir-483  Rno-Mir-483  Sha-Mir-483 
Node of Origin (locus) Theria
Node of Origin (family) Theria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007665.1: 10471986-10472046 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUGAGCCCUGCCGUGGGGGAGAGGGGGAAGGCGGGAGGGAAGAAGCGAGUGGUUCCAUGGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUCCUGCCUGUGCCUGCCUGCCUCGGC
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Structure
        10           20        30        40        50          
CAGCUGAGCCCUGCCGU--  -|         G           GA  A  C   UGGUUCC 
                   GG GGGAGAGGGG AAGGCGGGAGG  AG AG GAG       \
                   CC UCCUCUCCUC UUCUGCCCUCC  UC UC CUC       A
CGGCUCCGUCCGUCCGUGU  G^         -           UC  C  A   CUCCGGU 
 .       110       100        90         80        70
Deep sequencing
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CommentThere is a second dicer cut -1 on both arms
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-483_5p

mirBase accessionNone
Sequence
0- AAGGCGGGAGGGAAGAAGCGAGU -23
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Star sequence

Mmr-Mir-483_3p*

mirBase accessionNone
Sequence
38- UCACUCCUCUCCUCCCGUCUUCU -61
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