MirGeneDB ID | Mmr-Mir-483 |
Family name |
MIR-483 (all species) |
Seed |
AGGCGGG |
Species |
Gray mouse lemur (Microcebus murinus) |
MiRBase ID |
|
Paralogues |
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Orthologues |
Bta-Mir-483-v1
Bta-Mir-483-v2
Cfa-Mir-483
Cja-Mir-483
Cpo-Mir-483
Dno-Mir-483
Eca-Mir-483-v1
Eca-Mir-483-v2
Ete-Mir-483
Hsa-Mir-483
Mml-Mir-483
Mmu-Mir-483
Neu-Mir-483
Ocu-Mir-483
Pab-Mir-483
Rno-Mir-483
Sha-Mir-483
|
Node of Origin (locus) |
Theria
|
Node of Origin (family) |
Theria
|
Genome context (GCA_000165445.3_Mmur_3.0_genomic) |
CM007665.1: 10471986-10472046 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGCUGAGCCCUGCCGUGGGGGAGAGGGGGAAGGCGGGAGGGAAGAAGCGAGUGGUUCCAUGGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUCCUGCCUGUGCCUGCCUGCCUCGGC
Get precursor sequence
|
Structure | 10 20 30 40 50
CAGCUGAGCCCUGCCGU-- -| G GA A C UGGUUCC
GG GGGAGAGGGG AAGGCGGGAGG AG AG GAG \
CC UCCUCUCCUC UUCUGCCCUCC UC UC CUC A
CGGCUCCGUCCGUCCGUGU G^ - UC C A CUCCGGU
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
Comment | There is a second dicer cut -1 on both arms |
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Mmr-Mir-483_5p |
mirBase accession | None |
Sequence |
0- AAGGCGGGAGGGAAGAAGCGAGU -23
Get sequence
|
Star sequence |
Mmr-Mir-483_3p* |
mirBase accession | None |
Sequence |
38- UCACUCCUCUCCUCCCGUCUUCU -61
Get sequence
|