| MirGeneDB ID | Pab-Mir-483 |
|---|---|
| Family name | MIR-483 (all species) |
| Seed | AGACGGG |
| Species | Sumatran orangutan (Pongo abelii) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Bta-Mir-483-v1 Bta-Mir-483-v2 Cfa-Mir-483 Cja-Mir-483 Cpo-Mir-483 Dno-Mir-483 Eca-Mir-483-v1 Eca-Mir-483-v2 Ete-Mir-483 Hsa-Mir-483 Mml-Mir-483 Mmr-Mir-483 Mmu-Mir-483 Neu-Mir-483 Ocu-Mir-483 Rno-Mir-483 Sha-Mir-483 |
| Node of Origin (locus) | Theria |
| Node of Origin (family) | Theria |
| Genome context (GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces) |
CM054688.2: 2126903-2126965 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGCUGAGCAUUGCUGUGGGGGAGAGGGGGAAGACGGGAGGAAAGAAGGGAGUGGUUCCGUCACGCCUCCUCACUCCUCUCCUCCCGUCUUCUCCUCUCCUGCCCUUGUCUCCCUGUCUCAGCGet precursor sequence |
| Structure | 10 20 30 40 50 60 CAGCUGAGCAUUGCUGU- --| G A A G UGGUUCCG GGG GGAGAGGGG AAGACGGGAGGA AG AG GAG \ CCC CCUCUCCUC UUCUGCCCUCCU UC UC CUC U CGACUCUGUCCCUCUGUU GU^ - C C A CUCCGCAC 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | UG at 5p(-14), CNNC at 3p(+17) |
| Mature sequence | Pab-Mir-483_5p |
| mirBase accession | None |
| Sequence |
0- AAGACGGGAGGAAAGAAGGGAG -22
Get sequence
|
| Star sequence | Pab-Mir-483_3p* (predicted) |
| mirBase accession | None |
| Sequence |
41- CACUCCUCUCCUCCCGUCUUCU -63
Get sequence
|
