MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-124-P4

Family name MIR-124 (all species)
Seed AAGGCAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-124-P1-v1  Cmi-Mir-124-P1-v2  Cmi-Mir-124-P2-v1  Cmi-Mir-124-P2-v2  Cmi-Mir-124-P3-v1  Cmi-Mir-124-P3-v2 
Orthologues Aae-Mir-124  Aca-Mir-124-P4-v1  Aca-Mir-124-P4-v2  Ami-Mir-124-P4-v1  Ami-Mir-124-P4-v2  Asu-Mir-124  Bfl-Mir-124  Bge-Mir-124  Bla-Mir-124  Cel-Mir-124  Cpi-Mir-124-P4-v1  Cpi-Mir-124-P4-v2  Cte-Mir-124  Dan-Mir-124  Dma-Mir-124  Dme-Mir-124  Dmo-Mir-124  Dpu-Mir-124  Dre-Mir-124-P4-v1  Dre-Mir-124-P4-v2  Dsi-Mir-124  Dya-Mir-124  Esc-Mir-124  Gga-Mir-124-P4-v1  Gga-Mir-124-P4-v2  Gja-Mir-124-P4-v1  Gja-Mir-124-P4-v2  Gmo-Mir-124-P4-v1  Gmo-Mir-124-P4-v2  Hme-Mir-124  Isc-Mir-124  Lan-Mir-124  Lch-Mir-124-P4  Loc-Mir-124-P4-v1  Loc-Mir-124-P4-v2  Mal-Mir-124-P4-v1  Mal-Mir-124-P4-v2  Mun-Mir-124-P4-v1  Mun-Mir-124-P4-v2  Npo-Mir-124  Oan-Mir-124-P4-v1  Oan-Mir-124-P4-v2  Obi-Mir-124  Ovu-Mir-124  Pbv-Mir-124-P4a  Pbv-Mir-124-P4b-v1  Pbv-Mir-124-P4b-v2  Pfl-Mir-124  Pmi-Mir-124  Sko-Mir-124  Spt-Mir-124-P4  Spu-Mir-124  Sto-Mir-124-P4-v1  Sto-Mir-124-P4-v2  Tca-Mir-124  Tni-Mir-124-P4-v1  Tni-Mir-124-P4-v2  Xbo-Mir-124 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI635890.1: 3136753-3136811 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGGUGGGGGGGAUGUUCGGUUCUCGCUCUCAGUGUUCAUGGCGGAUCUUGAUUUAAUGUGGUACAAUUAAGGCACACGGUGAAUGCUAAGGGAGGGGCCGGCGGACAGCCCAGGGCAGA
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Structure
        10           20        30        40          50         
GGGUGGGGGGGAUGUUC---|     CG    C         GG  GA--       UUAAUG 
                    GGUUCU  CUCU AGUGUUCAU  CG    UCUUGAU      \
                    CCGGGG  GGGA UCGUAAGUG  GC    GGAAUUA      U
AGACGGGACCCGACAGGCGG^     A-    A         --  ACAC       ACAUGG 
       110       100         90        80          70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Star sequence

Cmi-Mir-124-P4_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGUGUUCAUGGCGGAUCUUGAU -22
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Mature sequence

Cmi-Mir-124-P4_3p
mirBase accessionNone
Sequence 
37- UAAGGCACACGGUGAAUGCUAA -59
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