MirGeneDB 2.1
MirGeneDB ID

Cpo-Mir-350

Family name MIR-350 (all species)
Seed UCACAAA
Species Guinea pig (Cavia porcellus)
MiRBase ID cpo-mir-350
Paralogues
Orthologues Cfa-Mir-350  Ete-Mir-350  Mmu-Mir-350  Ocu-Mir-350  Rno-Mir-350-P1  Rno-Mir-350-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(cavPor3)		 scaffold_13: 10177800-10177859 [-] UCSC
Precursor
(pre-Mir +30nt flank)
AAAAGCAAAACACCUUGCUCCUACAAGAGUAAAGUGCACGCGCUUUGGGACAGUGAGGAAAAUAAUGUUCACAAAGCCCAUACACUUUCACUCUUUAGGAGAGUUGCAGCUUCUUUUGGC
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Structure
        10          20        30         40         50         
AAAAGCAAAACACCUUG--      C      -      CACGC      -|    GUGAGG 
                   CUCCUA AAGAGU AAAGUG     GCUUUG GGACA      \
                   GAGGAU UUCUCA UUUCAC     CGAAAC CUUGU      A
CGGUUUUCUUCGACGUUGA      -      C      AUACC      A^    AAUAAA 
.       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
To
Star sequence

Cpo-Mir-350_5p*
mirBase accessionMIMAT0047186
Sequence 
0- AAAGUGCACGCGCUUUGGGACA -22
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Mature sequence

Cpo-Mir-350_3p
mirBase accessionMIMAT0047187
Sequence 
37- UUCACAAAGCCCAUACACUUUCA -60
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