| MirGeneDB ID | Mmr-Mir-350 |
|---|
| Family name |
MIR-350 (all species) |
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| Seed |
AAGUGCA |
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| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Cfa-Mir-350
Cpo-Mir-350
Eca-Mir-350
Ete-Mir-350
Laf-Mir-350
Mmu-Mir-350
Ocu-Mir-350
Rno-Mir-350-P1
Rno-Mir-350-P2
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007677.1: 42923946-42924006 [+]
UCSC
Ensembl
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Precursor
(pre-Mir +30nt flank) |
CAAAAACAAAAACCUUGCUCCUACAAGAGUAAAGUGCAUGCGCUUUGGGACAGUGAGGAAAAUAAUGUUCACAAAGCCCAUACACUUUUACCCUUUGGGAGAGUUGCAGCUUCUUUUGGCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
CAAAAACAAAAACCUUG--- C A - C C -| GUGAGG
CUCCUA AAG GU AAAGUG AUG GCUUUG GGACA \
GAGGGU UUC CA UUUCAC UAC CGAAAC CUUGU A
CCGGUUUUCUUCGACGUUGA - C U A C A^ AAUAAA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Mature sequence |
Mmr-Mir-350_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AAAGUGCAUGCGCUUUGGGACA -22
Get sequence
|
|---|
| Co-mature sequence |
Mmr-Mir-350_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUCACAAAGCCCAUACACUUUUAC -61
Get sequence
|
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