| MirGeneDB ID | Laf-Mir-350 |
|---|---|
| Family name | MIR-350 (all species) |
| Seed | UCACAAA |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cfa-Mir-350 Cpo-Mir-350 Eca-Mir-350 Ete-Mir-350 Mmr-Mir-350 Mmu-Mir-350 Ocu-Mir-350 Rno-Mir-350-P1 Rno-Mir-350-P2 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010043.1: 42772407-42772465 [-] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | GAACCAAAAAAACUUUGCUCCUACAAGAGUAAAGUGCACGCGCUUUGGGACAGUGAGGAAAAUAUUGUUCACAAAGCCCAUACACUUUUACCCUUUAGGAGAGUUGCAGCUUCUUUUGGGet precursor sequence |
| Structure | 10 20 30 40 50 GAACCAAAAAAACUUUG- C A - CACGC -| GUGAGG CUCCUA AAG GU AAAGUG GCUUUG GGACA \ GAGGAU UUC CA UUUCAC CGAAAC CUUGU A GGUUUUCUUCGACGUUGA - C U AUACC A^ UAUAAA 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | CNNC at 3p(+17), UGUG in loop |
| Star sequence | Laf-Mir-350_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- AAAGUGCACGCGCUUUGGGACA -22
Get sequence
|
| Mature sequence | Laf-Mir-350_3p |
| mirBase accession | None |
| Sequence |
37- UUCACAAAGCCCAUACACUUUU -59
Get sequence
|
