MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-350

Family name MIR-350 (all species)
Seed UCACAAA
Species Horse (Equus caballus)
MiRBase ID eca-mir-350
Paralogues
Orthologues Cfa-Mir-350  Cpo-Mir-350  Ete-Mir-350  Laf-Mir-350  Mmr-Mir-350  Mmu-Mir-350  Ocu-Mir-350  Rno-Mir-350-P1  Rno-Mir-350-P2 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009177.1: 2087483-2087544 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAAACAAAAACCCUUUGCUCCUAUAAGAGUAAAGUGCACGCGCUUUGGGACAGUGAGGAAGAUGAUGUUCACAAAGCCCAUACACUUUUACUCUUUAGGAGAGCCACAGCUACUGACUUGGU
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Structure
        10            20        30         40         50         
AAAACAAAAACCCUUUG----      U      -      CACGC      -|    GUGAGG 
                     CUCCUA AAGAGU AAAGUG     GCUUUG GGACA      \
                     GAGGAU UUCUCA UUUCAC     CGAAAC CUUGU      A
UGGUUCAGUCAUCGACACCGA      -      U      AUACC      A^    AGUAGA 
120       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Star sequence

Eca-Mir-350_5p*
mirBase accessionNone
Sequence 
0- AAAGUGCACGCGCUUUGGGACA -22
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Mature sequence

Eca-Mir-350_3p
mirBase accessionMIMAT0013191
Sequence 
37- UUCACAAAGCCCAUACACUUUUACU -62
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