| MirGeneDB ID | Ete-Mir-350 |
|---|
| Family name |
MIR-350 (all species) |
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| Seed |
AAGUGCA |
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| Species |
Lesser hedgehog tenrec (Echinops telfairi) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Cfa-Mir-350
Cpo-Mir-350
Mmu-Mir-350
Ocu-Mir-350
Rno-Mir-350-P1
Rno-Mir-350-P2
|
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| Node of Origin (locus) |
Eutheria
|
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| Node of Origin (family) |
Eutheria
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Genome context
(echTel2) |
JH980299: 58046876-58046935 [-]
UCSC
|
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Precursor
(pre-Mir +30nt flank) |
UAAAGCAAAAAACUUUGCUCCUACAAGAGUGAAGUGCACGCGCUUUGGGACAGUGAGGAAAAUAAUGUUCACAAAGCCCAUACACUUUGACCCUUUAGGAGAGUUGCAGCUUCUUUUGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UAAAGCAAAAAACUUUG-- C A - CACGC -| GUGAGG
CUCCUA AAG GU GAAGUG GCUUUG GGACA \
GAGGAU UUC CA UUUCAC CGAAAC CUUGU A
GGGUUUUCUUCGACGUUGA - C G AUACC A^ AAUAAA
. 110 100 90 80 70 60 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Mature sequence |
Ete-Mir-350_5p |
| mirBase accession | None |
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| Sequence |
0- GAAGUGCACGCGCUUUGGGACA -22
Get sequence
|
|---|
| Co-mature sequence |
Ete-Mir-350_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UUCACAAAGCCCAUACACUUUGA -60
Get sequence
|
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