| MirGeneDB ID | Dgr-Mir-1997 |
|---|---|
| Family name | MIR-1997 (all species) |
| Seed | CUGCAGG |
| Species | Dimorphilus gyrociliatus (Dimorphilus gyrociliatus) |
| MiRBase ID | |
| Paralogues | |
| Orthologues | Cte-Mir-1997 Efe-Mir-1997-P1 Efe-Mir-1997-P2 Efe-Mir-1997-P3 Efe-Mir-1997-P4 Efe-Mir-1997-P5 Pdu-Mir-1997 Snu-Mir-1997 |
| Node of Origin (locus) | Sipuncula + Pleistoannelida |
| Node of Origin (family) | Sipuncula + Pleistoannelida |
| Genome context (GCA_904063045.1_Dgyrociliatus) |
CAJFCJ010000019.1: 871727-871785 [+] |
| Precursor (pre-Mir +30nt flank) | CGUAUUACACGCCAAGUCGGUGGUUCGGUGGGGCUGUUUGAGCCGGCAGAAUCCGUUAAGAGGUAUUCUGCAGGUACACAUCAGCCCCAUUUAGCCAUCGUUUUUCAUCGUCUAUAUCUGet precursor sequence |
| Structure | 10 20 30 40 50 CGUAUUACACGCCAAGU-- CG UU-| A G CCGUU CGGUGGUU GUGGGGCUG UG GCC GCAGAAU A GCUACCGA UACCCCGAC AC UGG CGUCUUA A UCUAUAUCUGCUACUUUUU UU UAC^ A A UGGAG 110 100 90 80 70 60 |
| Deep sequencing | |
| 3' NTU | Unknown |
| Motifs | CNNC at 3p(+17) |
| Star sequence | Dgr-Mir-1997_5p* (predicted) |
| mirBase accession | None |
| Sequence |
0- GGGCUGUUUGAGCCGGCAGAAU -22
Get sequence
|
| Mature sequence | Dgr-Mir-1997_3p (predicted) |
| mirBase accession | None |
| Sequence |
36- UCUGCAGGUACACAUCAGCCCCA -59
Get sequence
|
