MirGeneDB 3.0
MirGeneDB ID

Snu-Mir-1997

Family name MIR-1997 (all species)
Seed CUGCAGG
Species Peanut worm (Sipunculus nudus)
MiRBase ID
Paralogues
Orthologues Cte-Mir-1997  Dgr-Mir-1997  Efe-Mir-1997-P1  Efe-Mir-1997-P2  Efe-Mir-1997-P3  Efe-Mir-1997-P4  Efe-Mir-1997-P5  Pdu-Mir-1997 
Node of Origin (locus) Sipuncula + Pleistoannelida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(GCA_026874595.1_ASM2687459v1_Sipunculus_nudus)		 CM049322.1: 34244559-34244617 [-]
Precursor
(pre-Mir +30nt flank)
UCAUACCUUGAAAGAAGCGCCAGGCUGUGGGGUUGAUGGUUCCAUGCAAAGUCUUAAAUACUGGAACUCUGCAGGUUCACAUCAGCCCCGGAGAGUGGCUUUAUCACACCUGCGUGGAG
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Structure
        10          20        30        40         50         
UCAUACCUUGAAAGAAGC--    GG  G           GUU-| A    A   CUUAAA 
                    GCCA  CU UGGGGUUGAUG    CC UGCA AGU      \
                    CGGU  GA GCCCCGACUAC    GG ACGU UCA      U
GAGGUGCGUCCACACUAUUU    GA  G           ACUU^ -    C   AGGUCA 
       110       100        90        80         70        60
Deep sequencing
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3' NTU Yes
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ph
Star sequence

Snu-Mir-1997_5p* (predicted)
mirBase accessionNone
Sequence 
0- GGUUGAUGGUUCCAUGCAAAGU -22
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Mature sequence

Snu-Mir-1997_3p
mirBase accessionNone
Sequence 
37- UCUGCAGGUUCACAUCAGCCCC -59
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