MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-1997-P2

Family name MIR-1997 (all species)
Seed CUGCAGG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-1997-P1  Efe-Mir-1997-P3  Efe-Mir-1997-P4  Efe-Mir-1997-P5 
Orthologues Cte-Mir-1997  Dgr-Mir-1997  Pdu-Mir-1997  Snu-Mir-1997 
Node of Origin (locus) E. fetida
Node of Origin (family) Sipuncula + Pleistoannelida
Genome context
(Efe_combined)		 Efet.01.386486: 2534-2595 [+]
Precursor
(pre-Mir +30nt flank)
UUCCCACUGCUUAUUUGAGUGCUUGGCUGUUGGACUGAUGGUCCUUGCAUAGUGUUGGCUGAAUCAACUCUGCAGGUUCACAUCAGCCCUAUAGCCGGCACCAGUCUACAGGACGAGGAGUC
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Structure
        10           20        30        40         50          
UUCCCACUGCUUAUUUGA---|    U      U  A      GUC-      U   GUUGGC 
                     GUGCU GGCUGU GG CUGAUG    CUUGCA AGU      \
                     CACGG CCGAUA CC GACUAC    GGACGU UCA      U
CUGAGGAGCAGGACAUCUGAC^    -      U  C      ACUU      C   ACUAAG 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Efe-Mir-1997-P2_5p* (predicted)
mirBase accessionNone
Sequence 
0- UGGACUGAUGGUCCUUGCAUAGU -23
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Mature sequence

Efe-Mir-1997-P2_3p
mirBase accessionNone
Sequence 
38- UCUGCAGGUUCACAUCAGCCCUAU -62
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