MirGeneDB 3.0

MirGeneDB ID

Dgr-Mir-277-P21

Family name MIR-277 (all species)
Seed AAAUGCA
Species Dimorphilus gyrociliatus (Dimorphilus gyrociliatus)
MiRBase ID
Paralogues Dgr-Mir-277-P19  Dgr-Mir-277-P20 
Orthologues Aae-Mir-277  Aga-Mir-277  Agr-Mir-277  Bge-Mir-277  Bko-Mir-277  Bpl-Mir-277  Cel-Mir-277  Dan-Mir-277  Dlo-Mir-277  Dma-Mir-277  Dme-Mir-277  Dmo-Mir-277  Dpu-Mir-277  Dsi-Mir-277  Dya-Mir-277  Eba-Mir-277  Efe-Mir-277  Esc-Mir-277  Gpa-Mir-277  Gsp-Mir-277  Hme-Mir-277  Hru-Mir-277  Isc-Mir-277  Lgi-Mir-277  Llo-Mir-277  Mgi-Mir-277  Mom-Mir-277  Npo-Mir-277  Obi-Mir-277  Ovu-Mir-277  Pau-Mir-277  Pca-Mir-277  Pcr-Mir-277  Pdu-Mir-277  Pve-Mir-277  Rph-Mir-277  Sne-Mir-277  Snu-Mir-277  Tca-Mir-277  Tur-Mir-277  War-Mir-277 
Node of Origin (locus) D. gyrociliatus
Node of Origin (family) Protostomia
Genome context
(GCA_904063045.1_Dgyrociliatus)
CAJFCJ010000011.1: 145433-145532 [+]
Precursor
(pre-Mir +30nt flank)
CCGCAUUCUACGGACUGAGCGCCUACUCGACGCAUCAGAUUUUCGCGCAUUUGUUCAUAAUAUUUCUUUUCCUCAAAAAAACGAGGAAAAAAUUAUUUUUGAAUAGAAUAAAUGCACGAUCUGGUGUGGCGAGUGACGCUUGUUUACUACCUGCAUAUUU
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Structure
        10           20        30        40        50        60        70        80 
CCGCAUUCUACGGACUG---|   CC      A         UUU   C         CAUAAUAUUUCUUUUCCUCAAAAAA 
                    AGCG  UACUCG CGCAUCAGA   UCG GCAUUUGUU                         \
                    UCGC  GUGAGC GUGUGGUCU   AGC CGUAAAUAA                         A
UUUAUACGUCCAUCAUUUGU^   A-      G         ---   A         GAUAAGUUUUUAUUAAAAAAGGAGC 
.       150       140        130       120          110       100        90
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Star sequence

Dgr-Mir-277-P21_5p* (predicted)

mirBase accessionNone
Sequence
0- CGCAUCAGAUUUUCGCGCAUUUGUU -25
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Mature sequence

Dgr-Mir-277-P21_3p (predicted)

mirBase accessionNone
Sequence
78- UAAAUGCACGAUCUGGUGUGGC -100
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