MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-1277

Family name MIR-1277 (all species)
Seed AUAUAUA
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-1277
Paralogues
Orthologues Bta-Mir-1277  Cfa-Mir-1277  Cpo-Mir-1277  Eca-Mir-1277  Hsa-Mir-1277  Laf-Mir-1277  Mml-Mir-1277  Mmr-Mir-1277  Ocu-Mir-1277  Pab-Mir-1277 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH568243: 50739-50796 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUCGAUUUCUAUUCUCUCUAACCUCCCAAAUAUAUAUAUAUAUGUACGUAUGUGUAUAUGAGUGUAUACGUAGAUAUAUAUGUAUUUUUGGUGGGUCUAGUUUUUUCAUCUAUUGCUG
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Structure
        10         20         30        40        50        
AUCGAUUUCUAUUCUCU-   -|  UC     U            G        UGUAU 
                  CUA ACC  CCAAA AUAUAUAUAUAU UACGUAUG     A
                  GAU UGG  GGUUU UAUGUAUAUAUA AUGCAUAU     U
GUCGUUAUCUACUUUUUU   C^  GU     U            G        GUGAG 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
To
Mature sequence

Dno-Mir-1277_5p

mirBase accessionMIMAT0048037
Sequence
0- UAUAUAUAUAUAUGUACGUAUG -22
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Star sequence

Dno-Mir-1277_3p*

mirBase accessionMIMAT0048038
Sequence
36- UACGUAGAUAUAUAUGUAUUUU -58
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