| MirGeneDB ID | Mmr-Mir-1277 |
|---|
| Family name |
MIR-1277 (all species) |
|---|
| Seed |
AUAUAUA |
|---|
| Species |
Gray mouse lemur (Microcebus murinus) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Bta-Mir-1277
Cfa-Mir-1277
Cpo-Mir-1277
Dno-Mir-1277
Eca-Mir-1277
Hsa-Mir-1277
Laf-Mir-1277
Mml-Mir-1277
Ocu-Mir-1277
Pab-Mir-1277
|
|---|
| Node of Origin (locus) |
Eutheria
|
|---|
| Node of Origin (family) |
Eutheria
|
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Genome context
(GCA_000165445.3_Mmur_3.0_genomic) |
CM007693.1: 46565919-46565975 [+]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
AUCCAUUUCUAACCUCUCUAACCUCCCAAAUAUAUAUAUAUAUGUACGUAUGUGUAUAUAAAUGUAUACGUAGAUAUAUAUGUAUUUUUGGUGGGUUUAAUUUUUAUCAUCUCUUGC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AUCCAUUUCUAACCUCUCU-| UC U G UGUAU
AACC CCAAA AUAUAUAUAUAU UACGUAUG A
UUGG GGUUU UAUGUAUAUAUA AUGCAUAU U
CGUUCUCUACUAUUUUUAAU^ GU U G GUAAA
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
|---|
| Mature sequence |
Mmr-Mir-1277_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UAUAUAUAUAUAUGUACGUAUG -22
Get sequence
|
|---|
| Star sequence |
Mmr-Mir-1277_3p* |
| mirBase accession | None |
|---|
| Sequence |
36- UACGUAGAUAUAUAUGUAUUU -57
Get sequence
|
|---|
