MirGeneDB ID | Dno-Mir-1307 |
Family name |
MIR-1307 (all species) |
Seed |
CGACCGG |
Species |
Nine-banded armadillo (Dasypus novemcinctus) |
MiRBase ID |
dno-mir-1307
|
Paralogues |
|
Orthologues |
Bta-Mir-1307
Cfa-Mir-1307
Cja-Mir-1307
Eca-Mir-1307
Hsa-Mir-1307
Laf-Mir-1307-v1
Laf-Mir-1307-v2
Mml-Mir-1307
Mmr-Mir-1307-v1
Mmr-Mir-1307-v2
Ocu-Mir-1307
Pab-Mir-1307
|
Node of Origin (locus) |
Eutheria
|
Node of Origin (family) |
Eutheria
|
Genome context (dasNov3) |
JH572711: 404621-404682 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CAGCCAAGCCACAGCCACUGCCUAGCGACCUCGACCGGACCUCGACCGGCUCGUCUAUGUUGCAAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGACGGUCAAACAUACGAGUUUUCG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CAGCCAAGCCACAGCCA-- C GCG U A-| U A GC UCUAUG
CUG CUA ACC CGACCGG CC CG CCG UCG U
GGC GAU UGG GCUGGCU GG GC GGC AGC U
GCUUUUGAGCAUACAAACU A AGA U GC^ U - UC UAAACG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Mature sequence |
Dno-Mir-1307_5p |
mirBase accession | MIMAT0048045 |
Sequence |
0- UCGACCGGACCUCGACCGGCUCG -23
Get sequence
|
Star sequence |
Dno-Mir-1307_3p* |
mirBase accession | MIMAT0048046 |
Sequence |
39- ACUCGGCGUGGCGUCGGUCGUGG -62
Get sequence
|