MirGeneDB 3.0

MirGeneDB ID

Dno-Mir-1307

Family name MIR-1307 (all species)
Seed CGACCGG
Species Nine-banded armadillo (Dasypus novemcinctus)
MiRBase ID dno-mir-1307
Paralogues
Orthologues Bta-Mir-1307  Cfa-Mir-1307  Cja-Mir-1307  Eca-Mir-1307  Hsa-Mir-1307  Laf-Mir-1307-v1  Laf-Mir-1307-v2  Mml-Mir-1307  Mmr-Mir-1307-v1  Mmr-Mir-1307-v2  Ocu-Mir-1307  Pab-Mir-1307 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(dasNov3)
JH572711: 404621-404682 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCCAAGCCACAGCCACUGCCUAGCGACCUCGACCGGACCUCGACCGGCUCGUCUAUGUUGCAAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGACGGUCAAACAUACGAGUUUUCG
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Structure
        10          20        30         40        50        60
CAGCCAAGCCACAGCCA--   C   GCG   U       A-| U  A   GC   UCUAUG 
                   CUG CUA   ACC CGACCGG  CC CG CCG  UCG      U
                   GGC GAU   UGG GCUGGCU  GG GC GGC  AGC      U
GCUUUUGAGCAUACAAACU   A   AGA   U       GC^ U  -   UC   UAAACG 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
To
Mature sequence

Dno-Mir-1307_5p

mirBase accessionMIMAT0048045
Sequence
0- UCGACCGGACCUCGACCGGCUCG -23
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Star sequence

Dno-Mir-1307_3p*

mirBase accessionMIMAT0048046
Sequence
39- ACUCGGCGUGGCGUCGGUCGUGG -62
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