MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-1307-v1

Family name MIR-1307 (all species)
Seed CUCGGCG
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-1307-v2 
Orthologues Bta-Mir-1307  Cfa-Mir-1307  Cja-Mir-1307  Dno-Mir-1307  Eca-Mir-1307  Hsa-Mir-1307  Mml-Mir-1307  Mmr-Mir-1307-v1  Ocu-Mir-1307  Pab-Mir-1307 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010037.1: 15056756-15056817 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUGAAUCACUGCCACUGCCUGCCGACCUCGACCGGACCUCGACCGGCUCGUCUAUGUUGCCAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGGCGGUCAUACAUUCGAAUUUUCU
Get precursor sequence
Structure
        10          20        30         40        50        60
CAGCUGAAUCACUGCCA--       CCG   U       A-| U  A   GC   UCUAUG 
                   CUGCCUG   ACC CGACCGG  CC CG CCG  UCG      U
                   GGCGGAU   UGG GCUGGCU  GG GC GGC  AGC      U
UCUUUUAAGCUUACAUACU       AGA   U       GC^ U  -   UC   UAACCG 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-1307-v1_5p*
mirBase accessionNone
Sequence 
0- UCGACCGGACCUCGACCGGCUCG -23
Get sequence
Mature sequence

Laf-Mir-1307-v1_3p
mirBase accessionNone
Sequence 
39- ACUCGGCGUGGCGUCGGUCGUGG -62
Get sequence