| MirGeneDB ID | Laf-Mir-1307-v1 |
|---|---|
| Family name | MIR-1307 (all species) |
| Seed | CUCGGCG |
| Species | African bush elephant (Loxodonta africana) |
| MiRBase ID | |
| Paralogues | Laf-Mir-1307-v2 |
| Orthologues | Bta-Mir-1307 Cfa-Mir-1307 Cja-Mir-1307 Dno-Mir-1307 Eca-Mir-1307 Hsa-Mir-1307 Mml-Mir-1307 Mmr-Mir-1307-v1 Ocu-Mir-1307 Pab-Mir-1307 |
| Node of Origin (locus) | Eutheria |
| Node of Origin (family) | Eutheria |
| Genome context (GCA_000001905.1_Loxafr3.0) |
GL010037.1: 15056756-15056817 [+] UCSC Ensembl |
| Precursor (pre-Mir +30nt flank) | CAGCUGAAUCACUGCCACUGCCUGCCGACCUCGACCGGACCUCGACCGGCUCGUCUAUGUUGCCAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGGCGGUCAUACAUUCGAAUUUUCUGet precursor sequence |
| Structure | 10 20 30 40 50 60 CAGCUGAAUCACUGCCA-- CCG U A-| U A GC UCUAUG CUGCCUG ACC CGACCGG CC CG CCG UCG U GGCGGAU UGG GCUGGCU GG GC GGC AGC U UCUUUUAAGCUUACAUACU AGA U GC^ U - UC UAACCG 120 110 100 90 80 70 |
| Deep sequencing | |
| 3' NTU | No |
| Motifs | No |
| Star sequence | Laf-Mir-1307-v1_5p* |
| mirBase accession | None |
| Sequence |
0- UCGACCGGACCUCGACCGGCUCG -23
Get sequence
|
| Mature sequence | Laf-Mir-1307-v1_3p |
| mirBase accession | None |
| Sequence |
39- ACUCGGCGUGGCGUCGGUCGUGG -62
Get sequence
|
