MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-1307-v1

Family name MIR-1307 (all species)
Seed CUCGGCG
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-1307
Paralogues Mmr-Mir-1307-v2 
Orthologues Bta-Mir-1307  Cfa-Mir-1307  Cja-Mir-1307  Dno-Mir-1307  Eca-Mir-1307  Hsa-Mir-1307  Laf-Mir-1307-v1  Mml-Mir-1307  Ocu-Mir-1307  Pab-Mir-1307 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007675.1: 52866944-52867005 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-1307-v1)
Mir-1307-v1 CM007675.1: 52866944-52867005 [-] UCSC Ensembl
Mir-1307-v2 CM007675.1: 52866944-52867005 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUGAGUCGCUGCCACUGCCUACCAAUCUCGACCGGACCUCGACCGGCUCGUCUGUAUUGCCAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGGCGGUCAUACAUACGAAUUUUCA
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Structure
        10          20        30         40        50        60
CAGCUGAGUCGCUGCCA--       CCA   U       A-| U  A   GC   UCUGUA 
                   CUGCCUA   AUC CGACCGG  CC CG CCG  UCG      U
                   GGCGGAU   UGG GCUGGCU  GG GC GGC  AGC      U
ACUUUUAAGCAUACAUACU       AGA   U       GC^ U  -   UC   UAACCG 
120       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-1307-v1_5p*

mirBase accessionMIMAT0049136
Sequence
0- UCGACCGGACCUCGACCGGCUCG -23
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Mature sequence

Mmr-Mir-1307-v1_3p

mirBase accessionNone
Sequence
39- ACUCGGCGUGGCGUCGGUCGUGG -62
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