MirGeneDB 3.0
MirGeneDB ID

Pab-Mir-1307

Family name MIR-1307 (all species)
Seed CUCGGCG
Species Sumatran orangutan (Pongo abelii)
MiRBase ID
Paralogues
Orthologues Bta-Mir-1307  Cfa-Mir-1307  Cja-Mir-1307  Dno-Mir-1307  Eca-Mir-1307  Hsa-Mir-1307  Laf-Mir-1307-v1  Laf-Mir-1307-v2  Mml-Mir-1307  Mmr-Mir-1307-v1  Mmr-Mir-1307-v2  Ocu-Mir-1307 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_028885655.2_NHGRI_mPonAbe1-v2.0_traces)		 CM054687.2: 110370425-110370486 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGCUGAGUCACUGUCACUGCCUACCAAUCUCGACCGGACCUCGACCGGCUCGUCUGUGUUGCCAAUCGACUCGGCGUGGCGUCGGUCGUGGUAGAUAGGCGGUCAUGCAUACGAAUUUUCA
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Structure
        10          20        30         40        50        60
CAGCUGAGUCACUGUCA--       CCA   U       A-| U  A   GC   UCUGUG 
                   CUGCCUA   AUC CGACCGG  CC CG CCG  UCG      U
                   GGCGGAU   UGG GCUGGCU  GG GC GGC  AGC      U
ACUUUUAAGCAUACGUACU       AGA   U       GC^ U  -   UC   UAACCG 
120       110       100        90        80         70
Deep sequencing
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CommentThere is a second Dicer cut -1 on the 3p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Br Br Li Li
Star sequence

Pab-Mir-1307_5p*
mirBase accessionNone
Sequence 
0- UCGACCGGACCUCGACCGGCUCG -23
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Mature sequence

Pab-Mir-1307_3p
mirBase accessionNone
Sequence 
39- ACUCGGCGUGGCGUCGGUCGUGG -62
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