MirGeneDB 3.0
MirGeneDB ID

Eca-Mir-149

Family name MIR-149 (all species)
Seed CUGGCUC
Species Horse (Equus caballus)
MiRBase ID eca-mir-149
Paralogues
Orthologues Bta-Mir-149  Cfa-Mir-149  Cja-Mir-149  Cpo-Mir-149  Dno-Mir-149  Ete-Mir-149  Hsa-Mir-149  Laf-Mir-149  Mml-Mir-149  Mmr-Mir-149  Mmu-Mir-149  Ocu-Mir-149  Pab-Mir-149  Rno-Mir-149 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_002863925.1_EquCab3.0)		 CM009153.1: 25920892-25920953 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCCCGGAGCCUCAGGCCGGCGCCCAGGCUCUGGCUCCGUGUCUUCACUCCCGUGUGUGUCCGAGGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCUGCCGGAACAGCGCAGGUCACCGG
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Structure
        10         20         30         40        50        60 
CUGCCCGGAGCCUCAGG-     -|   A   UCU      -  G     A     GUGUGUG 
                  CCGGC GCCC GGC   GGCUCC GU UCUUC CUCCC       \
                  GGCCG CGGG UCG   UCGGGG CA GGAGG GAGGG       U
GGCCACUGGACGCGACAA     U^   G   UG-      G  G     -     AGGAGCC 
120       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsUGUG in loop
Tissue expression
-   +
Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er Er
Mature sequence

Eca-Mir-149_5p
mirBase accessionMIMAT0012973
Sequence 
0- UCUGGCUCCGUGUCUUCACUCCC -23
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Star sequence

Eca-Mir-149_3p* (predicted)
mirBase accessionNone
Sequence 
40- GAGGGAGGGACGGGGGCUGUGC -62
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