MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-149

Family name MIR-149 (all species)
Seed CUGGCUC
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID
Paralogues
Orthologues Bta-Mir-149  Cfa-Mir-149  Cja-Mir-149  Cpo-Mir-149  Dno-Mir-149  Eca-Mir-149  Ete-Mir-149  Hsa-Mir-149  Laf-Mir-149  Mml-Mir-149  Mmu-Mir-149  Ocu-Mir-149  Pab-Mir-149  Rno-Mir-149 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007668.1: 2348108-2348169 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UGCCUGGGGGCCCUCCGCCGGCGCCCGGGCUCUGGCUCCGUGUCUUCACUCCCGUGUUUUUCCGAGGAGGGAGGGAGGGACGGGGGCUGUGCUGGGGCAGCCGGAACAGCCCAGGUCACCGG
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Structure
        10         20         30         40        50        60 
UGCCUGGGGGCCCUCCG-     -|   G   UCU      -  G     A     GUGUUUU 
                  CCGGC GCCC GGC   GGCUCC GU UCUUC CUCCC       \
                  GGCCG CGGG UCG   UCGGGG CA GGAGG GAGGG       U
GGCCACUGGACCCGACAA     A^   G   UG-      G  G     -     AGGAGCC 
120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Mature sequence

Mmr-Mir-149_5p

mirBase accessionNone
Sequence
0- UCUGGCUCCGUGUCUUCACUCCC -23
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Star sequence

Mmr-Mir-149_3p*

mirBase accessionNone
Sequence
40- GAGGGAGGGACGGGGGCUGUGC -62
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