MirGeneDB 2.1
MirGeneDB ID

Efe-Mir-190-P11

Family name MIR-190 (all species)
Seed GAUAUGU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-190-P9  Efe-Mir-190-P10  Efe-Mir-190-P12 
Orthologues Aae-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cgi-Mir-190  Cte-Mir-190  Dan-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Esc-Mir-190  Hme-Mir-190  Isc-Mir-190  Npo-Mir-190  Obi-Mir-190  Ovu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Sko-Mir-190  Tca-Mir-190  Xbo-Mir-190 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.129016: 2219-2283 [+]
Precursor
(pre-Mir +30nt flank)
AAUGCAGAGGAAAGCUCGCUAUCGUCCGUGAGAUAUGUUUGAUAUAUUUGGUGGUUCGUCGUUGGCUAAGUCCACCGAUUGUCAGACAUAUCUAGCGGAGAGGCGCUGCAGCGCAACUGGGAAGG
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Structure
        10            20        30        40        50        60   
AAUGCAGAGGAAAGCUC----|  A  G     G              UAU       UUCGUCGU 
                     GCU UC UCCGU AGAUAUGUUUGAUA   UUGGUGG        \
                     CGG AG AGGCG UCUAUACAGACUGU   AGCCACC        U
GGAAGGGUCAACGCGACGUCG^  -  -     A              U--       UGAAUCGG 
   120       110        100         90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-190-P11_5p
mirBase accessionNone
Sequence 
0- AGAUAUGUUUGAUAUAUUUGGUGG -24
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Star sequence

Efe-Mir-190-P11_3p*
mirBase accessionNone
Sequence 
43- ACCGAUUGUCAGACAUAUCUAG -65
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