MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-190-P12

Family name MIR-190 (all species)
Seed GAUAUGU
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-190-P9  Efe-Mir-190-P10  Efe-Mir-190-P11 
Orthologues Aae-Mir-190  Aga-Mir-190  Agr-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Egr-Mir-190  Esc-Mir-190  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Isc-Mir-190  Mgi-Mir-190  Mom-Mir-190  Npo-Mir-190  Obi-Mir-190  Ofu-Mir-190  Ovu-Mir-190  Pau-Mir-190  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Pve-Mir-190  Rph-Mir-190  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Tca-Mir-190  Tur-Mir-190  War-Mir-190  Xbo-Mir-190 
Node of Origin (locus) E. fetida
Node of Origin (family) Bilateria
Genome context
(Efe_combined)		 Efet.01.318588: 3126-3186 [+]
Precursor
(pre-Mir +30nt flank)
AGAACGGACGUCCAGCGUUGCGUGACGACCAGAUAUGUUUGAUAUAUUUGGUGGUUGAUGUGCUAUGCUACCAAUUGUCAGACAUGUCGAGCCGUUGGUCUUCGGACGUUAAUCAGAGAUU
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Structure
        10        20        30               40        50        60 
AGAACGGACGUCCAGCGUUGCGU  C     -------|            UAU       UUGAUG 
                       GA GACCA       GAUAUGUUUGAUA   UUGGUGG      \
                       CU CUGGU       CUGUACAGACUGU   AACCAUC      U
UUAGAGACUAAUUGCAGG-----  U     UGCCGAG^            U--       GUAUCG 
 .       110            100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Mature sequence

Efe-Mir-190-P12_5p
mirBase accessionNone
Sequence 
0- AGAUAUGUUUGAUAUAUUUGGUGG -24
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Star sequence

Efe-Mir-190-P12_3p*
mirBase accessionNone
Sequence 
39- ACCAAUUGUCAGACAUGUCGAG -61
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