MirGeneDB 3.0
MirGeneDB ID

Efe-Mir-36-P9

Family name MIR-36 (all species)
Seed CACCGGG
Species Common brandling worm (Eisenia fetida)
MiRBase ID
Paralogues Efe-Mir-36-P10 
Orthologues Agr-Mir-36  Bge-Mir-36  Cbr-Mir-36-o9  Cte-Mir-36  Dgr-Mir-36  Dlo-Mir-36  Dma-Mir-36  Dpu-Mir-36  Eba-Mir-36  Gsp-Mir-36  Isc-Mir-36  Lhy-Mir-36  Llo-Mir-36  Mgi-Mir-36  Mom-Mir-36  Npo-Mir-36  Ofu-Mir-36  Pau-Mir-36  Pcr-Mir-36  Pdu-Mir-36  Pve-Mir-36  Rph-Mir-36  Snu-Mir-36  Tca-Mir-36  War-Mir-36 
Node of Origin (locus) E. fetida
Node of Origin (family) Protostomia
Genome context
(Efe_combined)		 Efet.01.42296: 4397-4458 [+]
Precursor
(pre-Mir +30nt flank)
UCCCCGCACAGGAAACGGUCGCUUAAACUUGGUGAAUGUAUUCCGGGUAGGUGGUCCUUAUUAAUAUUCAUCACCGGGUUUACAUUCAUCCCGUUCUUUGUGGCAUUUUCAGCUGACCCAGG
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Structure
        10         20         30        40        50        60 
UCCCCGCACAGGAAACG-     UUA-|  UU          UU  G   A    GUCCUUA 
                  GUCGC    AAC  GGUGAAUGUA  CC GGU GGUG       \
                  CGGUG    UUG  CUACUUACAU  GG CCA CUAC       U
GGACCCAGUCGACUUUUA     UUUC^  CC          UU  G   -    UUAUAAU 
120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Efe-Mir-36-P9_5p*
mirBase accessionNone
Sequence 
0- GGUGAAUGUAUUCCGGGUAGGUG -23
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Mature sequence

Efe-Mir-36-P9_3p
mirBase accessionNone
Sequence 
40- UCACCGGGUUUACAUUCAUCCC -62
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