Mir-137-P1b-v2

MirGeneDB ID

Gmo-Mir-137-P1b-v2

Family name

MIR-137 (all species)

Seed

AUUGCUU

Species

Cod (Gadus morhua)

MiRBase ID

Paralogues

Gmo-Mir-137-P1b-v1 Gmo-Mir-137-P3a-v1 Gmo-Mir-137-P3a-v2 Gmo-Mir-137-P3b-v1 Gmo-Mir-137-P3b-v2

Orthologues

Aca-Mir-137-P1-v1 Aca-Mir-137-P1-v2 Ami-Mir-137-P1-v1 Ami-Mir-137-P1-v2 Asu-Mir-137 Bfl-Mir-137 Bta-Mir-137-P1-v1 Bta-Mir-137-P1-v2 Cbr-Mir-137 Cel-Mir-137 Cfa-Mir-137-P1-v1 Cfa-Mir-137-P1-v2 Cgi-Mir-137 Cli-Mir-137-P1-v1 Cli-Mir-137-P1-v2 Cmi-Mir-137-P1 Cpi-Mir-137-P1-v1 Cpi-Mir-137-P1-v2 Cte-Mir-137 Dan-Mir-137 Dma-Mir-137 Dme-Mir-137 Dmo-Mir-137 Dno-Mir-137-P1-v1 Dno-Mir-137-P1-v2 Dpu-Mir-137 Dre-Mir-137-P1b-v1 Dre-Mir-137-P1b-v2 Dsi-Mir-137 Dya-Mir-137 Ebu-Mir-137 Esc-Mir-137 Ete-Mir-137-P1-v1 Ete-Mir-137-P1-v2 Gga-Mir-137-P1-v1 Gga-Mir-137-P1-v2 Gja-Mir-137-P1-v1 Gja-Mir-137-P1-v2 Hme-Mir-137 Hsa-Mir-137-P1-v1 Hsa-Mir-137-P1-v2 Isc-Mir-137 Lan-Mir-137 Lch-Mir-137-P1 Lgi-Mir-137 Loc-Mir-137-P1-v1 Loc-Mir-137-P1-v2 Mal-Mir-137-P1b-v1 Mal-Mir-137-P1b-v2 Mdo-Mir-137-P1-v1 Mdo-Mir-137-P1-v2 Mml-Mir-137-P1-v1 Mml-Mir-137-P1-v2 Mmu-Mir-137-P1-v1 Mmu-Mir-137-P1-v2 Mun-Mir-137-P1 Oan-Mir-137-P1-v1 Oan-Mir-137-P1-v2 Obi-Mir-137 Ocu-Mir-137-P1-v1 Ocu-Mir-137-P1-v2 Pbv-Mir-137-P1-v1 Pbv-Mir-137-P1-v2 Pma-Mir-137-o1 Rno-Mir-137-P1-v1 Rno-Mir-137-P1-v2 Sha-Mir-137-P1-v1 Sha-Mir-137-P1-v2 Sko-Mir-137 Spt-Mir-137-P1 Spu-Mir-137 Sto-Mir-137-P1 Tgu-Mir-137-P1-v1 Tgu-Mir-137-P1-v2 Xbo-Mir-137 Xla-Mir-137-P1 Xtr-Mir-137-P1

Node of Origin (locus)

Clupeocephala

Node of Origin (family)

Bilateria

Genome context
(Gadus_morhua.gadMor1.dna.toplevel)

contig503924: 33-93 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUCCCCUCACCUGGGCAGACUAUCUUCGGCGACGGGUAUUCUUGGGUGGAUAAUACGGAUCACGUUGUUAUUGCUUAAGAAUACGCGUAGUCGAGGAGAGUCCUAAUCUUCACUCUGCGGC

Get precursor sequence

Structure

        10          20        30        40        50        60
CUCCCCUCACCUGGGCA--|   A        G   G           UG A    ACGGA 
                   GACU UCUUCGGC ACG GUAUUCUUGGG  G UAAU     U
                   CUGA AGGAGCUG UGC CAUAAGAAUUC  U AUUG     C
CGGCGUCUCACUUCUAAUC^   G        A   G           GU -    UUGCA 
 .       110       100        90        80         70

Deep sequencing

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3' NTU

Unknown

Motifs

CNNC at 3p(+17)

Tissue expression

Br	Gi	He	In	Li	Sk	Sp	Wh

Star sequence

Gmo-Mir-137-P1b-v2_5p*

mirBase accession

None

Sequence

0- GACGGGUAUUCUUGGGUGGAUAAU -24

Get sequence

Mature sequence

Gmo-Mir-137-P1b-v2_3p

mirBase accession

None

Sequence

38- UAUUGCUUAAGAAUACGCGUAGU -61

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