MirGeneDB 3.0
MirGeneDB ID

Gmo-Mir-24-P1

Family name MIR-24 (all species)
Seed GGCUCAG
Species Cod (Gadus morhua)
MiRBase ID gmo-mir-24a-4
Paralogues Gmo-Mir-24-P2b  Gmo-Mir-24-P3  Gmo-Mir-24-P4a  Gmo-Mir-24-P4b 
Orthologues Dre-Mir-24-P1  Lch-Mir-24-P1  Loc-Mir-24-P1  Pma-Mir-24-o1  Sto-Mir-24-P1  Tni-Mir-24-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(Gadus_morhua.gadMor1.dna.toplevel)		 contig393630: 353-416 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUGGUGCCGUCGUUUGGGCUCAACCUCCUGUGCCUACUGAGCUGAUAACAGUUAGAUGUCAAAACAAGCACUGGCUCAGUUCAGCAGGAACCGGAGUUACGCCUUCAAUAAACAGCGAGGACG
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Structure
        10           20        30        40        50        60  
AGUGGUGCCGUCGUUUG---|  UC   C   U  G   A         UAA    UAGAUGUC 
                    GGC  AAC UCC GU CCU CUGAGCUGA   CAGU        \
                    CCG  UUG AGG CA GGA GACUUGACU   GUCA        A
GCAGGAGCGACAAAUAACUU^  CA   -   C  A   C         CG-    CGAACAAA 
  120       110       100         90        80         70
Deep sequencing
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CommentThere are Drosha cuts -1 and +1 on the 5p arm.
3' NTU No
MotifsNo
Tissue expression
-   +
Br Gi He In Li Sk Sp Wh
Star sequence

Gmo-Mir-24-P1_5p*
mirBase accessionMIMAT0044047
Sequence 
0- GUGCCUACUGAGCUGAUAACAGU -23
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Mature sequence

Gmo-Mir-24-P1_3p
mirBase accessionMIMAT0044048
Sequence 
42- UGGCUCAGUUCAGCAGGAACCG -64
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