MirGeneDB 3.0

MirGeneDB ID

Hsa-Mir-628

Family name MIR-628 (all species)
Seed UGCUGAC
Species Human (Homo sapiens)
MiRBase ID hsa-mir-628
Paralogues
Orthologues Bta-Mir-628  Cfa-Mir-628  Cja-Mir-628  Dno-Mir-628  Eca-Mir-628  Ete-Mir-628  Laf-Mir-628  Mml-Mir-628  Mmr-Mir-628  Ocu-Mir-628  Pab-Mir-628 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(hg38)
chr15: 55372952-55373012 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUCGGAGAUAGCUGUUGUGUCACUUCCUCAUGCUGACAUAUUUACUAGAGGGUAAAAUUAAUAACCUUCUAGUAAGAGUGGCAGUCGAAGGGAAGGGCUCAUCUGACUUCUGGAAACCUA
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Structure
        10           20        30         40        50         
UAUCGGAGAUAGCUGUU---|U   A      CA  -   A   A           GUAAAA 
                    G GUC CUUCCU  UG CUG CAU UUUACUAGAGG      U
                    C CGG GAAGGG  GC GAC GUG GAAUGAUCUUC      U
AUCCAAAGGUCUUCAGUCUA^U   -      AA  U   G   A           CAAUAA 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Dc Dc Dr Dr Xp Xp Bl Br Br Ce Ce Co Fo He Ki Le Li Li Lu Pa Pl Pl Sk Sk Sk Sm Sp Sp St Te Th Ut
Mature sequence

Hsa-Mir-628_5p

mirBase accessionMIMAT0004809
Sequence
0- AUGCUGACAUAUUUACUAGAGG -22
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Proposed targets microrna.org: MIMAT0004809
TargetScanVert: hsa-miR-628-5p
TargetMiner: hsa-miR-628-5p
miRDB: MIMAT0004809
Co-mature sequence

Hsa-Mir-628_3p

mirBase accessionMIMAT0003297
Sequence
38- UCUAGUAAGAGUGGCAGUCGAAG -61
Get sequence
Proposed targets microrna.org: MIMAT0003297
TargetScanVert: hsa-miR-628-3p
TargetMiner: hsa-miR-628-3p
miRDB: MIMAT0003297