MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-628

Family name MIR-628 (all species)
Seed UGCUGAC
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues
Orthologues Bta-Mir-628  Cfa-Mir-628  Cja-Mir-628  Dno-Mir-628  Eca-Mir-628  Ete-Mir-628  Hsa-Mir-628  Mml-Mir-628  Mmr-Mir-628  Ocu-Mir-628  Pab-Mir-628 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010086.1: 1491551-1491611 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUUGGGAAAGCUGUUGUGUCACUUCCUCAUGCUGACAUGUUUACUAGAGGGUAAAACUGAUAACCGUCUAGUAAGAGUGGCAGUCGAAGGGAAGGGCUCAUCUGACUUCUGGAAACCUG
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Structure
        10           20        30         40        50          
CUGUUGGGAAAGCUGUU--- U   A      CA  -   A   G         -| GUAAAA 
                    G GUC CUUCCU  UG CUG CAU UUUACUAGA GG      \
                    C CGG GAAGGG  GC GAC GUG GAAUGAUCU CC      C
GUCCAAAGGUCUUCAGUCUA U   -      AA  U   G   A         G^ AAUAGU 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Wh
Mature sequence

Laf-Mir-628_5p
mirBase accessionNone
Sequence 
0- AUGCUGACAUGUUUACUAGAGG -22
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Co-mature sequence

Laf-Mir-628_3p
mirBase accessionNone
Sequence 
38- UCUAGUAAGAGUGGCAGUCGAAG -61
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