MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-628

Family name MIR-628 (all species)
Seed UGCUGAC
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-628
Paralogues
Orthologues Bta-Mir-628  Cfa-Mir-628  Cja-Mir-628  Dno-Mir-628  Eca-Mir-628  Ete-Mir-628  Hsa-Mir-628  Laf-Mir-628  Mml-Mir-628  Mmr-Mir-628  Pab-Mir-628 
Node of Origin (locus) Eutheria
Node of Origin (family) Eutheria
Genome context
(oryCun2_add)		 chr17: 17179502-17179562 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AAUGGGACAUAGCUAUUGUGUCACUUCCUCAUGCUGACAUAUUUACUAGAAGGUAAAAUUCAUAACCUUCUAGUAAGAGUGGCAGUUGAAGGGAAGGGCUCAUCUGACUUCUGGAAACUGU
Get precursor sequence
Structure
        10           20        30         40        50         
AAUGGGACAUAGCUAUU---|U   A      CAU-    A   A            UAAAA 
                    G GUC CUUCCU    GCUG CAU UUUACUAGAAGG     U
                    C CGG GAAGGG    UGAC GUG GAAUGAUCUUCC     U
UGUCAAAGGUCUUCAGUCUA^U   -      AAGU    G   A            AAUAC 
 .       110       100         90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Mature sequence

Ocu-Mir-628_5p
mirBase accessionMIMAT0048539
Sequence 
0- AUGCUGACAUAUUUACUAGAAGG -23
Get sequence
Star sequence

Ocu-Mir-628_3p*
mirBase accessionMIMAT0048540
Sequence 
38- UCUAGUAAGAGUGGCAGUUGAAG -61
Get sequence